science

Publications

We believe in the power of open science to drive innovation and foster collaboration. Here are the published papers from our funded researchers.

The following publications report findings from projects funded by the Biswas Family Foundation.

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February 3, 2026

Scaling Medical AI Across Clinical Contexts

Nature Medicine
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Associated Project:
CURE-Bench: Universal Benchmark for All-Disease Drug Repurposing
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Papers
January 6, 2026

Deep-Learning Prediction of Gene Expression from Personal Genomes

Genome Biology
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Associated Project:
Biswas Center for Transformative Computational Cancer Biology
Principal Investigator:

Katherine Pollard, PhD, Director of Data Science & Biotechnology, Gladstone Institutes

Category:
Papers
December 24, 2025

International Retrospective Observational Study of Continual Learning for AI on Endotracheal Tube Placement from Chest Radiographs

NEJM AI
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Associated Project:
The MAIDA Initiative: Democratizing Global Medical Imaging Data Sharing for Safer and Fairer AI
Principal Investigator:

Pranav Rajpurkar, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School

Category:
Papers
December 19, 2025

Greater Than the Sum of Its Parts: Building Substructure into Protein Encoding Models

Arxiv
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Associated Project:
AI for Cancer Genomic Medicine: Circuitry, Treatment, Personalization
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Preprints
December 13, 2025

Athena

GitHub
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Associated Project:
CURE-Bench
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Software
December 13, 2025

Graph AI generates neurological hypotheses validated in molecular, organoid, and clinical systems

arXiv
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Associated Project:
CURE-Bench
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Papers
November 20, 2025

CONCERT Predicts Niche-Aware Perturbation Responses in Spatial Transcriptomics

Biorxiv
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Associated Project:
AI for Cancer Genomic Medicine: Circuitry, Treatment, Personalization
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Preprints
November 4, 2025

Generalizable AI Predicts Immunotherapy Outcomes Across Cancers and Treatments

medRxiv
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Associated Project:
AI for Cancer Genomic Medicine: Circuitry, Treatment, Personalization
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Preprints
October 22, 2025

Democratizing AI Scientists Using ToolUniverse

Arxiv
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Associated Project:
CURE-Bench: Universal Benchmark for All-Disease Drug Repurposing
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Preprints
October 5, 2025

A global log for medical AI

arXiv
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Associated Project:
CURE-Bench
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Papers
September 29, 2025

ToolUniverse

ToolUniverse
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Associated Project:
CURE-Bench
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Data Ecosystem
September 9, 2025

Combinatorial Prediction of Therapeutic Perturbations Using Causally Inspired Neural Networks

Nature Biomedical Engineering
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Associated Project:
AI for Cancer Genomic Medicine: Circuitry, Treatment, Personalization
Principal Investigator:

Marinka Zitnik, PhD, Associate Professor of Biomedical Informatics, Harvard Medical School

Category:
Papers

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